Genomic SELEX Screening of Regulatory Targets of Escherichia coli Transcription Factors, Methods in Molecular Biology 1837 , 49-69 Springer 2018 Author:Shimada, T., Ogasawara, H., Ishihama, A.
Signal transduction network for environmental adaptation in Escherichia coli , Survival and Death in Bacteria , 69-76 Research Signport 2005 Author:Eguchi Y, Minagawa S, Ogasawara H, Yamamoto K, Utsumi R
論文 CsgI (YccT) Is a novel Inhibitor of Curli fimbriae formation in Escherichia coli preventing CsgA polymerization and curli gene expression. Int. J. Mol. Sci.,24:4357 2023 Author:Sano, K., Kobayashi, H., Chuta, H., Matsuyoshi, N., Kato, Y., Ogasawara, H.
Roles of methionine and cysteine residues of the Escherichia coli sensor kinase HprS in reactive chlorine species sensing FEBS Lett.,597:573-584 2023 Author:Yamaji, K., Taniguchi, R., Urano, H., Ogasawara, H.
Single-target regulators constitute the minority group of transcription factors in Escherichia coli K-12 Frontiers in Microbiology ,12:697803 2021 Author:Shimada, T., Ogasawara, H., Kobayashi, I., Kobayashi, N., Ishihama, A.
Novel regulators of the csgD gene encoding the master regulator of biofilm formation in Escherichia coli K-12 Microbiology-SGM,166:880-890 2020 Author:Ogasawara H, Ishizuka T, Hotta S, Aoki M, Shimada T, Ishihama A.
Cellulose acetate/multi-wall carbon nanotube/Ag nanofiber composite for antibacterial applications Materials Science & Engineering C ,110:110679 2020 Author:Jatoi A. W, Ogasawara H, Kim I. S. Ni Q-Q
Regulatory role of pyruvate-sensing BtsSR in biofilm formation by Escherichia coli K-12. FEMS Microbiol Lett.,366:fnz251 2019 Author:Ogasawara H, Ishizuka T, Yamaji K, Kato Y, Shimada T, Ishihama A
Characterizations and application of CA/ZnO/AgNP composite nanofibers for sustained antibacterial properties Materials Science ＆ Engineering C,105:110077 2019 Author:Jatoi A. W, Kim I. S. Ogasawara H, Ni Q-Q
Polyvinyl alcohol nanofiber based three phase wound dressings for sustained wound healing applications Materials Letters,241:168-171 2019 Author:Jatoi A. W, Ogasawara H, Kim I. S. Ni Q-Q
Dopa-based facile procedure to synthesize AgNP/cellulose nanofiber composite for antibacterial applications Applied Nanoscience 2019 Author:Jatoi A. W, Ogasawara H, Kim I. S. Ni Q-Q
Fabrication of antibacterial electrospun cellulose acetate/ silver-sulfadiazine nanofibers composites for wound dressings applications Polymer Testing,74:39-44 2019 Author:Khan M. Q, Kharaghani D, Sanaullah, Shahzad A, Saito Y, Yamamoto T, Ogasawara H, Kim I. S
Fabrication of electrospun antibacterial PVA/Cs nanofibers loaded with CuNPs and AgNPs by an in-situ method Polymer Testing,72:315-321 2018 Author:Kharaghani D, Khan M. Q, Tamada Y, Ogasawara H, Inoue Y, Saito, Y, Hashmi M, Kim I. S
Single-target regulators form a minor group of transcription factors in Escherichia coli K-12. Nucleic Acids Res.,46:3921-3936 2018 Author:Shimada, T., Ogasawara, H., Ishihama, A.
Digestion of peptidoglycan near the cross-link is necessary for the growth of Bacillus subtilis Microbiology-SGM,164:299-307 2018 Author:Hashimoto, M., Matsushima, H., Suparthana, I., P., Ogasawara, H., Yamamoto, H., Teng, C., Sekiguchi, J.
A structural sketch of RcdA, a transcription factor controlling the master regulator of biofilm formation FEBS Lett.,591:2019-2031 2017 Author:Sugino H, Usui T, Shimada T, Nakano M, Ogasawara H, Ishihama H, Hirata A
Cross-regulation between two common ancestral response regulators, HprR and CusR, in Escherichia coli Microbiology-SGM,163:243-252 2017 Author:Urano H, Yoshida M, Ogawa A, Yamamoto K, Ishihama A, Ogasawara H
Cooperative regulation of the common target genes between hydrogen peroxide-response YedVW and copper-response CusSR in Escherichia coli. Microbiology-SGM,161:729-738 2015 Author:Urano H, Umezawa Y, Yamamoto K, Ishihama A, Ogasawara H
Role of transcription factor NimR (YeaM) in sensitivity control of Escherichia coli to 2-nitroimidazole. FEMS Microbiol Lett.,362:1-8 2015 Author:Ogasawara H, Ohe S, Ishihama A
Involvement of cAMP-CRP in transcription activation and repression of the pck gene encoding PEP carboxykinase, the key enzyme of gluconeogenesis. FEMS Microbiol. Lett,355:93-99 2014 Author:Nakano M., Ogasawara H., Shimada T., Yamamoto K., Ishihama A.
Repression of flagellar genes in exponential phase by CsgD and CpxR, two crucial modulators of Escherichia coli biofilm formation. J Bacteriol.,196:707-715 2014 Author:Dudin O, Geiselmann J, Ogasawara H, Ishihama A, Lacour S.
Screening of promoter-specific transcription factors: multiple regulators for the sdiA gene involved in cell division control and quorum sensing. Microbiology-SGM,159:2501-2512 2013 Author:Shimada K, Ogasawara H, Yamada K, Shimura M, Kori A, Shimada T, Yamanaka Y, Yamamoto K, Ishihama A.
Identification of the set of genes, including nonannotated morA, under the direct control of ModE in Escherichia coli. J Bacteriol,195:4496-4505 2013 Author:Kurata T, Katayama A, Hiramatsu M, Kiguchi Y, Takeuchi M, Watanabe T, Ogasawara H, Ishihama A, Yamamoto K.
A novel regulator RcdA of the csgD gene encoding the master regulator of biofilm formation in Escherichia coli. Microbiologyopen,1:381-394 2012 Author:Shimada T, Katayama Y, Kawakita S, Ogasawara H, Nakano M, Yamamoto K, Ishihama A
A novel regulation targets of the metal response BasS-BasR two-component system of Escherichia coli. Microbiology-SGM,158:1482-1492 2012 Author:Ogasawara H., Shinohara S, Yamamoto K, Ishihama A
Role of the biofilm master regulator CsgD in cross-regulation between biofilm formation and flagellar synthesis Journal of Bacteriology,193:2587-2597 2011 Author:Ogasawara, H., Yamamoto, K., Ishihama, A.
Regulation of the Escherichia coli csgD promoter: interplay between five transcription factors. Microbiology-SGM,156:2470-2483 2010 Author:Ogasawara, H., Yamada, K., Kori, A., Yamamoto, K., Ishihama, A.
Regulatory role of MlrA in transcription activation of csgD, the master regulator of biofilm formation in Escherichia coli. FEMS Microbiology Letters,312:160-168 2010 Author:Ogasawara, H., Yamamoto, K., Ishihama, A.
Involvement of multiple transcription factors for metal-induced spy gene expression in Escherichia coli. Journal of Biotechnology,133:196-200 2008 Author:Yamamoto K., Ogasawara H., Ishihama A.
The transcription regulator AllR senses both allantoin and glyoxylate and controls a set of genes for degradation and reutilization of purines. Microbiology-SGM,154:3366 – 3378 2008 Author:Hasegawa A., Ogasawara H., Kori A., Teramoto J., Ishihama A.
Genomic SELEX Search for Target Promoters under the Control of PhoQP-RstBA Signal Relay Cascade. Journal of Bacteriology,189:4791-4799 2007 Author:Ogasawara H., Hasegawa A., Kanda E., Miki T., Yamamoto K., Ishihama A.
PdhR (pyruvate dehydrogenase complex regulator) controls the respiratory electron transport system in Escherichia coli. Journal of Bacteriology,189:5534-5541 2007 Author:Ogasawara H., Ishida Y., Yamada K., Yamamoto K., Ishihama A.
Negative regulation of DNA repair gene (uvrA) expression by ArcA/ArcB two-component system in Escherichia coli. FEMS Microbiology Letters,251:243-249 2005 Author:Ogasawara H., Teramoto J., Yamamoto S., Hirao K., Yamamoto K., Ishihama A., Utsumi R.
Negative regulation of DNA repair gene (ung) expression by the CpxR/CpxA two-component system in Escherichia coli K-12 and induction of mutations by increased expression of CpxR. Journal of Bacteriology,186:8317-8325 2004 Author:Ogasawara H., Teramoto J., Hirao K., Yamamoto K., Ishihama A., Utsumi R.
Identification and molecular characterization of the Mg2+ stimulon of Escherichia coli. Journal of Bacteriology,185:3696-3702 2003 Author:Minagawa S., Ogasawara H., Kato A., Yamamoto K., Eguchi Y., Oshima T., Mori H., Ishihama A., Utsumi R.
Novel mode of transcription regulation of divergently overlapping promoters by PhoP, the regulator of two-component system sensing external magnesium availavility. Molecular Microbiology,45:423-438 2002 Author:Yamamoto K., Ogasawara H., Fujita N., Utsumi R., Ishihama A.
Novel non-coding RNA regulated by ModE in Escherichia coli. 第32回日本分子生物学会年会 2009 Presenter:Hiramatsu, M., Ogasawara, H., Ishihama, A. Yamamoto, K
Growth phase-depending regulation of csgD, the master regulator of curli fimbriae formation: Interplay between multiple transcription factors. 第32回日本分子生物学会年会 2009 Presenter:Ogasawara, H., Kori, A., Yamada, K., Yamamoto, K., Ishihama, A
Regulatory roles of nucleoid-associated proteins in Escherichia coli. 第32回日本分子生物学会年会 2009 Presenter:Ishihama, A., Teramoto, J., Ogasawara, H., Shimada, T. Yamamoto, K
Growth phase-dependent regulation of csgD, the master regulator of biofilm formation: Interplay between multiple transcription factors 3rd Internatl. Conf. Environmental, Industrial and Applied Microbiology (BioMicroWorld2009) 2009 Presenter:Ishihama, A., Ogasawara, H., Shimada, T., Teramoto, J., Kori,A., Yamada, K., Yamamoto, K
Control of biofilm formation by Escherichia coli: Interplay between multiple transcription factors 20th Internatl. Symp. Micro-NanoMechatronics Human Sci., Symp. “Systems Cell Engineering by Multi-scale Manipulation.” 2009 Presenter:Ogasawara H, Kori A, Yamada K, Yamamoto K, and Ishihama A
The E.coli csgD promoter for control of biofilm formation: Interplay between eight transcription factors in promoter binding. JSPS-DST Asian Academic Seminar 2008 2008 Presenter:Ogasawara H, Kori A.,Yamada K., Yamamoto K., Ishihama A.
Negative regulation of DNA repair gene (ung) expression by CpxR/CpxA two-component system in Escherichia coli K-12 and increased expression of CpxR. Gordon Research Conference. 2004 Presenter:Ogasawara H, Teramoto J, Hirao K, Yamamoto K, Ishihama A, and Utsumi R.
Mg2+ regulon in Escherichia coli K-12: DNA microarray-directed identification of PhoP binding site The 4th International workshop of Advanced Genomics. From Genomics to Proteomics. 2001 Presenter:Ogasawara H, Minagawa S, Yamamoto K, Ishihama A, Oshima T, Mori H and Utsumi R.
Regulation of the E. coli csgD gene encoding the master regulator of biofilm formation: Interplay between multiple transcription factors. In: Proc. 2009 Internatl. Symp. Micro-Nano Mechatronics Human Sci. (Fukuda, T. et al., eds), IEEE (Institute of Electrical and Electronics Engineers),:186-189 2009 Author:Ogasawara, H., Kori, A., Yamada, K., Yamamoto, K., Ishihama, A.
Multi-scale genetics of transcription network: Understanding the regulatory roles of all 300 transcription factors from a single organism Escherichia coli. In Micro-Nano Mechatronics and Human Science (Fukuda, T., ed.), IEEE (Institute of Electrical and Electronics Engineers),:21-27 2007 Author:Ishihama A., Ogasawara H., Shimada T., Teramoto J., Hasegawa A., Umezawa Y., Yabuki K., Ishida Y., Inaba T., Kori A., Yamada K., Kitai Y., Kobayashi N., Kato D., and Yamamoto K.
Transcription factor promoter interaction networks. In Micro-Nano Mechatronics and Human Science (Fukuda, T., ed.), IEEE (Institute of Electrical and Electronics Engineers),:165-169 2005 Author:Ishihama A, Shimada T, Ogasawara H, Teramoto J, and Yamamoto K
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